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Converter Overview

This project provides a converter that transforms source image data into OME-Tiff or OME-Zarr format. When creating a github release, a Docker image is built and published to Docker Hub with corresponding version tags here.

Architecture

The converter workflow consists of:

  • Creating a Source reader to access image data and metadata.
  • Creating a Writer to generate OME output.
  • The Writer queries the Source for metadata and data, then writes the output.
flowchart TD
    Converter["Converter"]
    Source["Source Reader"]
    Writer["Writer"]
    Output["OME Output"]

    Converter --> Source
    Converter --> Writer
    Writer -->|Query Metadata| Source
    Writer -->|Query Data| Source
    Writer --> Output