Program

Image annotation with napari¶

Hands on session by Johannes Franz

Additional resources¶

Bioimage Analysis with Napari - https://www.fabriziomusacchio.com/teaching/teaching_bioimage_analysis/

Biapy - accessible deep learning for bioimage analysis¶

Lecture by Daniel Franco-Barranco

Followed by hands-on using ‘code-free’ BiaPy notebooks on Google Colab

Additional resources¶

Documentation: https://biapy.readthedocs.io/en/latest/

Preparing data and fine-tuning an AI model¶

Hands-on session: train a model that segments nuclei from the actin channel, using public data from the Image Data Resource. See AI_training.

Additional resources¶